10.2 3D EM Volume Imaging

This part of the lecture focuses on the following two topics:

  1. Serial block face SEM (i.e., SBF-SEM)
  2. Focused ion beam SEM (i.e., FIB-SEM)
SBF-SEM and FIB-SEM Illustrations

Figure 10.5: SBF-SEM and FIB-SEM Illustrations

10.2.1 Serial Section TEM / SEM

Manual Collection on EM Grids

Figure 10.6: Manual Collection on EM Grids

60 to 80 nm sections are made for serial-section TEMs or serial section tomographies (i.e., thicker sections).

However, this is technically challenging - the order of the sections must be maintained. Losing sections loses information about the sample.

This process is also time-consuming as each section has to be individually imaged. The images must then be aligned and the area of interest reconstructed in 3D.

Serial Section TEM of Intracellular Bacteria

Figure 10.7: Serial Section TEM of Intracellular Bacteria

An array tomography can help automate the collection of sections on tape and image those sections in a SEM.

10.2.2 Summary

Summary of 3D Imaging Techniques

Figure 10.8: Summary of 3D Imaging Techniques